ECOD: domain e1l0wB1

Domain ID e1l0wB1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	000023546
Type:	Automatic domain
Parent:	e1b8aA1
Range:	B:1001-1104
PDB:	1l0w
PDB Description:	Aspartyl-tRNA synthetase
UniProt:	P36419
Hsap BLAST neighbor:	Q6PI48
Species:	Thermus thermophilus

Domain
In chain context
In PDB context

Structure of domain e1l0wB1

Domains in the same chain:

Download Pymol

e1l0wB1	B:1001-1104	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1l0wB3	B:1105-1294,B:1415-1580	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1l0wB2	B:1295-1414	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain

Domains in the same PDB:

e1l0wA1	A:1-104	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1l0wA3	A:105-294,A:415-580	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1l0wA2	A:295-414	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain
e1l0wB1	B:1001-1104	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1l0wB3	B:1105-1294,B:1415-1580	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e1l0wB2	B:1295-1414	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain	Prokaryotic AspRS, insert domain

Structural contacts of domain e1l0wB1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1l0wA3	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1l0wA3	B:x,y,z->A:-X-1,Y-1/2,-Z-1/2	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e1l0wA1	B:x,y,z->A:-X-1,Y-1/2,-Z-1/2	Nucleic acid-binding proteins	Interaction Interface Pymol