Domain ID e1lnuA2

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  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000075410
Type: Automatic domain
Parent: e1hdmA2
Range: A:1-82
Ligands: NAG
PDB: 1lnu
PDB Description: H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A-B ALPHA CHAIN
UniProt: P14434
Hsap BLAST neighbor: P01909
Species: Mus musculus

Structure of domain e1lnuA2

Domains in the same chain:

e1lnuA2 A:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuA1 A:84-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1lnuA2 A:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuA1 A:84-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuB2 B:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuB1 B:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuC2 C:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuC1 C:84-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuD2 D:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuD1 D:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuE2 E:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuE1 E:84-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuF2 F:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuF1 F:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuG2 G:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuG1 G:84-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1lnuH2 H:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1lnuH1 H:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1lnuA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1lnuB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1lnuB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1lnuC2 A:x,y,z->C:X-1,Y,Z-1 MHC antigen-recognition domain Interaction Interface Pymol
e1lnuC2 A:X,Y,Z->C:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e1lnuH1 A:x,y,z->H:-X+1,Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e1lnuD1 A:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol