ECOD: domain e1ls5B3

Domain ID e1ls5B3

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: acid protease
F: Asp

UID:	001171475
Type:	Automatic domain
Parent:	e1wkrA3
Range:	B:178-328
PDB:	1ls5
PDB Description:	PLASMEPSIN IV
UniProt:	Q8IM16
Hsap BLAST neighbor:	P07339
Species:	Plasmodium falciparum

Domain
In chain context
In PDB context

Structure of domain e1ls5B3

Domains in the same chain:

Download Pymol

e1ls5B2	B:1-177	cradle loop barrel	RIFT-related	acid protease
e1ls5B3	B:178-328	cradle loop barrel	RIFT-related	acid protease

Domains in the same PDB:

e1ls5A2	A:1-177	cradle loop barrel	RIFT-related	acid protease
e1ls5A3	A:178-328	cradle loop barrel	RIFT-related	acid protease
e1ls5B2	B:1-177	cradle loop barrel	RIFT-related	acid protease
e1ls5B3	B:178-328	cradle loop barrel	RIFT-related	acid protease

Structural contacts of domain e1ls5B3 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ls5A3	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e1ls5A2	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e1ls5B3	B:x,y,z->B:-X,-X+Y,-Z+1/3	RIFT-related	Interaction Interface Pymol
e1ls5B2	B:x,y,z->B:-X,-X+Y,-Z+1/3	RIFT-related	Interaction Interface Pymol
e1ls5B3	B:-X,-X+Y,-Z+1/3->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1ls5B2	B:-X,-X+Y,-Z+1/3->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1ls5A3	B:x,y,z->A:X-Y,-Y+1,-Z+2/3	RIFT-related	Interaction Interface Pymol
e1ls5A2	B:x,y,z->A:X-Y,-Y+1,-Z+2/3	RIFT-related	Interaction Interface Pymol
e1ls5A3	B:x,y,z->A:-Y,X-Y+1,Z+1/3	RIFT-related	Interaction Interface Pymol
e1ls5B3	B:x,y,z->B:X-Y+1,-Y+2,-Z+2/3	RIFT-related	Interaction Interface Pymol
e1ls5B3	B:X-Y+1,-Y+2,-Z+2/3->B:x,y,z	RIFT-related	Interaction Interface Pymol