Domain ID e1lvoB2

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  • A: alpha arrays
  • X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
  • H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
  • T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
  • F: Peptidase_C30
UID: 001102676
Type: Automatic domain
Parent: e2lizA1
Range: B:186-300
Ligands: DIO MRD SO4
PDB: 1lvo
PDB Description: Replicase, hydrolase domain
UniProt: P0C6Y5
Species:

Structure of domain e1lvoB2

Domains in the same chain:

e1lvoB1 B:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoB2 B:186-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain

Domains in the same PDB:

e1lvoA1 A:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoA2 A:186-299 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e1lvoB1 B:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoB2 B:186-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e1lvoC1 C:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoC2 C:186-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e1lvoD1 D:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoD2 D:186-301 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e1lvoE1 E:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoE2 E:186-299 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e1lvoF1 F:1-185 cradle loop barrel RIFT-related FMN-binding split barrel
e1lvoF2 F:186-299 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain

Structural contacts of domain e1lvoB2 of H-group "Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1lvoA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1lvoA2 B:x,y,z->A:X,Y,Z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e1lvoD2 B:x,y,z->D:-X+1,Y-1/2,-Z+1 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e1lvoE2 B:X,Y,Z->E:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e1lvoD1 B:x,y,z->D:-X+2,Y-1/2,-Z+2 RIFT-related Interaction Interface Pymol
e1lvoD1 B:x,y,z->D:-X+2,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol