| UID: | 001159343 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1pd0A4 |
| Range: | B:216-300 |
| Ligands: | ZN |
| PDB: | 1m2v |
| PDB Description: | protein transport protein SEC24 |
| UniProt: | P40482 |
| Hsap BLAST neighbor: | O95486 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e1m2vB12
Domains in the same chain:
| e1m2vB11 | B:61-73,B:133-218,B:556-646 | Immunoglobulin-like beta-sandwich | Immunoglobulin-related | Common fold of diphtheria toxin/transcription factors/cytochrome f |
| e1m2vB12 | B:216-300 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e1m2vB13 | B:301-459,B:480-555 | HAD domain-like | HAD domain-related | vWA-like |
| e1m2vB10 | B:647-753 | ERP29 C domain-like | Helical domain of Sec23/24 | Helical domain of Sec23/24 |
| e1m2vB14 | B:754-822,B:848-926 | Gelsolin-like | Gelsolin-like | Gelsolin-like |
Domains in the same PDB:
| e1m2vA7 | A:2-45,A:392-523 | Immunoglobulin-like beta-sandwich | Immunoglobulin-related | Common fold of diphtheria toxin/transcription factors/cytochrome f |
| e1m2vA5 | A:45-119 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e1m2vA6 | A:120-198,A:221-391 | HAD domain-like | HAD domain-related | vWA-like |
| e1m2vA4 | A:524-626 | ERP29 C domain-like | Helical domain of Sec23/24 | Helical domain of Sec23/24 |
| e1m2vA8 | A:627-728,A:750-768 | Gelsolin-like | Gelsolin-like | Gelsolin-like |
| e1m2vB11 | B:61-73,B:133-218,B:556-646 | Immunoglobulin-like beta-sandwich | Immunoglobulin-related | Common fold of diphtheria toxin/transcription factors/cytochrome f |
| e1m2vB12 | B:216-300 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e1m2vB13 | B:301-459,B:480-555 | HAD domain-like | HAD domain-related | vWA-like |
| e1m2vB10 | B:647-753 | ERP29 C domain-like | Helical domain of Sec23/24 | Helical domain of Sec23/24 |
| e1m2vB14 | B:754-822,B:848-926 | Gelsolin-like | Gelsolin-like | Gelsolin-like |
Structural contacts of domain e1m2vB12 of H-group "Rubredoxin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1m2vA8 | B:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Gelsolin-like | Interaction Interface Pymol |
| e1m2vA4 | B:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Helical domain of Sec23/24 | Interaction Interface Pymol |
| e1m2vA7 | B:x,y,z->A:X-1/2,-Y+1/2,-Z+1 | Immunoglobulin-related | Interaction Interface Pymol |
| e1m2vA8 | B:-X+1/2,-Y+1,Z-1/2->A:x,y,z | Gelsolin-like | Interaction Interface Pymol |
