| UID: | 000048178 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1m6yA1 |
| Range: | B:115-215 |
| Ligands: | SAH SO4 |
| PDB: | 1m6y |
| PDB Description: | S-adenosyl-methyltransferase mraW |
| UniProt: | Q9WZX6 |
| Hsap BLAST neighbor: | A6NJ78 |
| Species: | Thermotoga maritima |
Structure of domain e1m6yB1
Domains in the same chain:
| e1m6yB2 | B:8-114,B:216-286 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e1m6yB1 | B:115-215 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Domains in the same PDB:
| e1m6yA2 | A:2-114,A:216-294 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e1m6yA1 | A:115-215 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
| e1m6yB2 | B:8-114,B:216-286 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e1m6yB1 | B:115-215 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Structural contacts of domain e1m6yB1 of H-group "SAM/DNA-glycosylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1m6yA1 | B:x,y,z->A:Z+1/2,-X-1/2,-Y | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1m6yA2 | B:X-1/2,-Y-1/2,-Z->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e1m6yA2 | B:x,y,z->A:Z,X,Y | Rossmann-related | Interaction Interface Pymol |
| e1m6yA1 | B:Z,X,Y->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1m6yB1 | B:x,y,z->B:-Z,X-1/2,-Y-1/2 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1m6yB1 | B:-Z,X-1/2,-Y-1/2->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
