Domain ID e1m9xD1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 000056882
Type: Automatic domain
Parent: e2pxrC1
Range: D:12-145
PDB: 1m9x
PDB Description: HIV-1 Capsid
UniProt: Q72497
Species: Human immunodeficiency virus 1

Structure of domain e1m9xD1

Structural contacts of domain e1m9xD1 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1m9xC1 D:X-1,Y,Z->C:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1m9xA1 D:x,y,z->A:X,Y,Z Cyclophilin-like Interaction Interface Pymol
e1m9xF1 D:X-2,Y,Z->F:x,y,z Cyclophilin-like Interaction Interface Pymol
e1m9xC1 D:x,y,z->C:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1m9xA1 D:x,y,z->A:X,Y,Z-1 Cyclophilin-like Interaction Interface Pymol
e1m9xD1 D:x,y,z->D:X-1,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1m9xD1 D:X-1,Y,Z->D:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1m9xF1 D:X-1,Y,Z->F:x,y,z Cyclophilin-like Interaction Interface Pymol
e1m9xA1 D:X-1,Y,Z->A:x,y,z Cyclophilin-like Interaction Interface Pymol
e1m9xB1 D:x,y,z->B:X,Y,Z Cyclophilin-like Interaction Interface Pymol