ECOD: domain e1mabA1

Domain ID e1mabA1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: ATP-synt_ab_N

UID:	000021472
Type:	Automatic domain
Parent:	e2jdiA1
Range:	A:24-94
PDB:	1mab
PDB Description:	PROTEIN (F1-ATPASE ALPHA CHAIN)
UniProt:	P15999
Hsap BLAST neighbor:	P25705
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e1mabA1

Domains in the same chain:

Download Pymol

e1mabA1	A:24-94	cradle loop barrel	RIFT-related	Alanine racemase-C
e1mabA3	A:95-379	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1mabA2	A:380-510	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e1mabA1	A:24-94	cradle loop barrel	RIFT-related	Alanine racemase-C
e1mabA3	A:95-379	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1mabA2	A:380-510	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase
e1mabB1	B:10-81	cradle loop barrel	RIFT-related	Alanine racemase-C
e1mabB2	B:82-357	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1mabB3	B:358-475	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase
e1mabG2	G:1-45,G:74-87,G:206-270	ATP synthase (F1-ATPase), gamma subunit	ATP synthase (F1-ATPase), gamma subunit	ATP synthase (F1-ATPase), gamma subunit

Structural contacts of domain e1mabA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1mabB1	A:-Y,X-Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1mabB1	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1mabB2	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1mabA3	A:x,y,z->A:-X+2/3,-X+Y+1/3,-Z+1/3	P-loop domains-related	Interaction Interface Pymol
e1mabA3	A:-X+2/3,-X+Y+1/3,-Z+1/3->A:x,y,z	P-loop domains-related	Interaction Interface Pymol