Domain ID e1mdbA2

Download files:
  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: a+b domain in acetyl-CoA synthetase-like proteins
  • T: a+b domain in acetyl-CoA synthetase-like proteins
  • F: AMP-binding_C
UID: 000005891
Type: Manual and representative domain
Range: A:429-536
Ligands: AMP DBH
PDB: 1mdb
PDB Description: 2,3-dihydroxybenzoate-AMP ligase
UniProt: P40871
Hsap BLAST neighbor: Q4G176
Species: Bacillus subtilis

Structure of domain e1mdbA2

Domains in the same chain:

Download Pymol

e1mdbA3 A:1-176 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdbA4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdbA1 A:353-428 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1mdbA2 A:429-536 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Domains in the same PDB:

e1mdbA3 A:1-176 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdbA4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdbA1 A:353-428 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1mdbA2 A:429-536 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Structural contacts of domain e1mdbA2 of H-group "a+b domain in acetyl-CoA synthetase-like proteins":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mdbA3 A:X-1,Y,Z->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1mdbA3 A:-Y,X-Y,Z+1/3->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol