Domain ID e1mdfA2

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  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: a+b domain in acetyl-CoA synthetase-like proteins
  • T: a+b domain in acetyl-CoA synthetase-like proteins
  • F: AMP-binding_C
UID: 000070669
Type: Automatic domain
Parent: e4isbA4
Range: A:428-535
PDB: 1mdf
PDB Description: 2,3-dihydroxybenzoate-AMP ligase
UniProt: P40871
Hsap BLAST neighbor: Q4G176
Species: Bacillus subtilis

Structure of domain e1mdfA2

Domains in the same chain:

e1mdfA3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdfA4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdfA1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1mdfA2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Domains in the same PDB:

e1mdfA3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdfA4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1mdfA1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1mdfA2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Structural contacts of domain e1mdfA2 of H-group "a+b domain in acetyl-CoA synthetase-like proteins":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4isbA4 A:x,y,z->A:-Y,X-Y,Z+1/3 a+b domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1mdfA3 A:-Y,X-Y,Z+1/3->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1mdfA3 A:X-1,Y,Z->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1mdfA3 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol