Domain ID e1mdyA1

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  • A: alpha duplicates or obligate multimers
  • X: HLH-like
  • H: HLH, helix-loop-helix DNA-binding domain
  • T: HLH, helix-loop-helix DNA-binding domain
  • F: HLH
UID: 000004275
Type: Manual and representative domain
Range: A:1-166
PDB: 1mdy
PDB Description: PROTEIN (MYOD BHLH DOMAIN)
In assembly with: e1mdyB1
UniProt: P10085
Hsap BLAST neighbor: P15172
Species: Mus musculus

Structure of domain e1mdyA1 in assembly with e1mdyB1

Structural contacts of domain e1mdyA1 of H-group "HLH, helix-loop-helix DNA-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mdyB1 A:X,Y,Z->B:x,y,z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyC1 A:X,Y-1,Z->C:x,y,z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyA1 A:-X+1/2,Y-1/2,-Z->A:x,y,z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyC1 A:-X+1/2,Y-1/2,-Z->C:x,y,z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyB1 A:x,y,z->B:X,Y,Z-1 HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol
e1mdyB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z+1 HLH, helix-loop-helix DNA-binding domain Interaction Interface Pymol