Domain ID e1mfzB2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: UDPG_MGDP_dh_N
UID: 000098227
Type: Automatic domain
Parent: e1mv8A2
Range: B:1-202
Ligands: GDX
PDB: 1mfz
PDB Description: GDP-mannose 6-dehydrogenase
UniProt: P11759
Hsap BLAST neighbor: O60701
Species: Pseudomonas aeruginosa

Structure of domain e1mfzB2

Domains in the same chain:

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e1mfzB2 B:1-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1mfzB1 B:203-300 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1mfzB3 B:301-436 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Domains in the same PDB:

e1mfzA2 A:1-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1mfzA1 A:203-300 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1mfzA3 A:301-436 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e1mfzB2 B:1-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1mfzB1 B:203-300 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1mfzB3 B:301-436 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e1mfzC2 C:1-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1mfzC1 C:203-300 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1mfzC3 C:301-436 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e1mfzD2 D:1-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1mfzD1 D:203-300 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1mfzD3 D:301-436 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Structural contacts of domain e1mfzB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1mfzA1 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1mfzA3 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e1mfzC3 B:x,y,z->C:-X+2,-Y+1,Z-1/2 Rossmann-related Interaction Interface Pymol
e1mfzB2 B:x,y,z->B:X,-Y+1,-Z+1 Rossmann-related Interaction Interface Pymol
e1mfzB2 B:X,-Y+1,-Z+1->B:x,y,z Rossmann-related Interaction Interface Pymol