ECOD: domain e1miyA1

Domain ID e1miyA1

A: alpha complex topology
X: PDEase-like
H: Poly A polymerase C-terminal region-like
T: Poly A polymerase C-terminal region-like
F: PolyA_pol_RNAbd,tRNA_NucTran2_2

UID:	000061499
Type:	Automatic domain
Parent:	e1miwA1
Range:	A:140-404
Ligands:	CTP
PDB:	1miy
PDB Description:	tRNA CCA-adding enzyme
UniProt:	Q7SIB1
Species:	Geobacillus stearothermophilus

Domains in the same chain:

Download Pymol

e1miyA2	A:1-139	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1miyA1	A:140-404	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like

Domains in the same PDB:

e1miyA2	A:1-139	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1miyA1	A:140-404	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like
e1miyB2	B:1-139	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1miyB1	B:140-404	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like

Structural contacts of domain e1miyA1 of H-group "Poly A polymerase C-terminal region-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1miyB1	A:-Y,X-Y,Z+1/3->B:x,y,z	Poly A polymerase C-terminal region-like	Interaction Interface Pymol
e1miyB1	A:-Y+1,X-Y,Z+1/3->B:x,y,z	Poly A polymerase C-terminal region-like	Interaction Interface Pymol
e1miyB2	A:-Y+1,X-Y,Z+1/3->B:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e1miyB2	A:X,Y,Z->B:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e1miyA2	A:x,y,z->A:-X,-X+Y,-Z+1/3	Nucleotidyltransferase	Interaction Interface Pymol
e1miyA2	A:-X,-X+Y,-Z+1/3->A:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e1miyB1	A:-Y+1,X-Y+1,Z+1/3->B:x,y,z	Poly A polymerase C-terminal region-like	Interaction Interface Pymol