ECOD: domain e1mu2A3

Domain ID e1mu2A3

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: RNase_H

UID:	000011133
Type:	Manual and representative domain
Range:	A:430-555
Ligands:	SO4
PDB:	1mu2
PDB Description:	HIV-2 RT
UniProt:	P04584
Hsap BLAST neighbor:	Q9UQG0
Species:	Human immunodeficiency virus 2

Domains in the same chain:

Download Pymol

e1mu2A8	A:3-242	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1mu2A7	A:243-316	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e1mu2A6	A:317-427	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase
e1mu2A3	A:430-555	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Domains in the same PDB:

e1mu2A8	A:3-242	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1mu2A7	A:243-316	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e1mu2A6	A:317-427	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase
e1mu2A3	A:430-555	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1mu2B2	B:6-241	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e1mu2B1	B:242-315	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e1mu2B3	B:316-426	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase

Structural contacts of domain e1mu2A3 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1mu2B3	A:X,Y,Z->B:x,y,z	RNaseH-like domain in reverse transcriptase	Interaction Interface Pymol
e1mu2B1	A:X,Y,Z->B:x,y,z	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol
e1mu2A8	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e1mu2B2	A:X-1/2,-Y-1/2,-Z->B:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e1mu2A3	A:x,y,z->A:-X+1/2,-Y,Z-1/2	Ribonuclease H-like	Interaction Interface Pymol
e1mu2A3	A:-X+1/2,-Y,Z-1/2->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e1mu2B1	A:-X+1/2,-Y,Z-1/2->B:x,y,z	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol