Domain ID e1n0vD5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 000101618
Type: Automatic domain
Parent: e2c78A3
Range: D:3-343
PDB: 1n0v
PDB Description: Elongation factor 2
UniProt: P32324
Hsap BLAST neighbor: P13639
Species: Saccharomyces cerevisiae

Structure of domain e1n0vD5

Domains in the same chain:

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e1n0vD5 D:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1n0vD1 D:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1n0vD2 D:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1n0vD4 D:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1n0vD3 D:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e1n0vC5 C:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1n0vC1 C:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1n0vC2 C:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1n0vC4 C:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1n0vC3 C:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1n0vD5 D:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1n0vD1 D:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1n0vD2 D:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1n0vD4 D:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1n0vD3 D:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e1n0vD5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1n0vD3 D:x,y,z->D:X-1/2,-Y+1/2,-Z+1 EF-G C-terminal domain-like Interaction Interface Pymol
e1n0vD4 D:x,y,z->D:X-1/2,-Y+1/2,-Z+1 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1n0vD1 D:x,y,z->D:X-1/2,-Y+1/2,-Z+1 RIFT-related Interaction Interface Pymol
e1n0vC4 D:-X,Y-1/2,-Z+3/2->C:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1n0vC2 D:x,y,z->C:X,Y,Z EF-G C-terminal domain-like Interaction Interface Pymol
e1n0vC5 D:-X-1/2,-Y,Z-1/2->C:x,y,z P-loop domains-related Interaction Interface Pymol