Domain ID e1n38A1

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RdRP_5
UID: 000055033
Type: Automatic domain
Parent: e1mukA1
Range: A:776-889
Ligands: CH1
PDB: 1n38
PDB Description: Minor core protein lambda 3
UniProt: P0CK31
Species:

Structure of domain e1n38A1

Domains in the same chain:

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e1n38A2 A:2-379 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e1n38A4 A:380-775 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1n38A1 A:776-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1n38A5 A:891-1265 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3

Domains in the same PDB:

e1n38A2 A:2-379 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3 N-terminal additional helical subdomain in reovirus polymerase lambda3
e1n38A4 A:380-775 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1n38A1 A:776-889 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e1n38A5 A:891-1265 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3 C-terminal additional helical subdomain in reovirus polymerase lambda3

Structural contacts of domain e1n38A1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1n38A5 A:-X,Y-1/2,-Z+1/2->A:x,y,z C-terminal additional helical subdomain in reovirus polymerase lambda3 Interaction Interface Pymol