| UID: | 001387300 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1h2vC3 |
| Range: | A:481-665,A:688-790 |
| Ligands: | GOL |
| PDB: | 1n54 |
| PDB Description: | 80 kDa nuclear cap binding protein |
| UniProt: | Q09161 |
| Hsap BLAST neighbor: | Q09161 |
| Species: | Homo sapiens |
Structure of domain e1n54A2
Domains in the same chain:
| e1n54A3 | A:24-290 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1n54A4 | A:290-479 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1n54A2 | A:481-665,A:688-790 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
Domains in the same PDB:
| e1n54A3 | A:24-290 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1n54A4 | A:290-479 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1n54A2 | A:481-665,A:688-790 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e1n54B1 | B:33-125 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
Structural contacts of domain e1n54A2 of H-group "ARM repeat":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1n54B1 | A:X,Y,Z->B:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e1n54A3 | A:x,y,z->A:Y-1,X,-Z | ARM repeat | Interaction Interface Pymol |
| e1n54A4 | A:x,y,z->A:X-Y,-Y+1,-Z+1/3 | ARM repeat | Interaction Interface Pymol |
| e1n54A2 | A:x,y,z->A:X-Y,-Y,-Z+1/3 | ARM repeat | Interaction Interface Pymol |
| e1n54A2 | A:X-Y,-Y,-Z+1/3->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e1n54B1 | A:x,y,z->B:X-Y,-Y+1,-Z+1/3 | RNA-binding domain, RBD | Interaction Interface Pymol |
