Domain ID e1n5aA1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038605
Type: Automatic domain
Parent: e1k5nB1
Range: A:182-276
PDB: 1n5a
PDB Description: H-2 class I histocompatibility antigen, D-B alpha chain
UniProt: P01899
Hsap BLAST neighbor: P01893
Species: Mus musculus

Structure of domain e1n5aA1

Domains in the same chain:

e1n5aA2 A:1-181 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1n5aA1 A:182-276 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1n5aA2 A:1-181 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1n5aA1 A:182-276 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aB1 B:1-98 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aD2 D:1-181 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1n5aD1 D:182-274 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aE1 E:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aG2 G:2-181 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1n5aG1 G:182-274 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aH1 H:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aJ2 J:2-181 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1n5aJ1 J:182-274 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n5aK1 K:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1n5aA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1n5aB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1n5aG2 A:x,y,z->G:X,Y-1,Z MHC antigen-recognition domain Interaction Interface Pymol
e1n5aG2 A:x,y,z->G:-X,Y-1/2,-Z+1 MHC antigen-recognition domain Interaction Interface Pymol
e1n5aD2 A:x,y,z->D:-X+1,Y-1/2,-Z+1 MHC antigen-recognition domain Interaction Interface Pymol