ECOD: domain e1n8zC4

Domain ID e1n8zC4

A: few secondary structure elements
X: EGF-like
H: Growth factor receptor domain
T: Growth factor receptor domain
F: GF_recep_IV

UID:	000088334
Type:	Automatic domain
Parent:	e3b2vA3
Range:	C:489-607
PDB:	1n8z
PDB Description:	RECEPTOR PROTEIN-TYROSINE KINASE ERBB-2
UniProt:	P04626
Hsap BLAST neighbor:	P04626
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1n8zC4

Domains in the same chain:

Download Pymol

e1n8zC1	C:1-164	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1n8zC3	C:166-321	EGF-like	Growth factor receptor domain	Growth factor receptor domain
e1n8zC2	C:323-487	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1n8zC4	C:489-607	EGF-like	Growth factor receptor domain	Growth factor receptor domain

Domains in the same PDB:

e1n8zA1	A:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n8zA2	A:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n8zB1	B:1-120	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n8zB2	B:121-220	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1n8zC1	C:1-164	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1n8zC3	C:166-321	EGF-like	Growth factor receptor domain	Growth factor receptor domain
e1n8zC2	C:323-487	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e1n8zC4	C:489-607	EGF-like	Growth factor receptor domain	Growth factor receptor domain

Structural contacts of domain e1n8zC4 of H-group "Growth factor receptor domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1n8zB1	C:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1n8zA1	C:X,Y,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1n8zA1	C:x,y,z->A:X-1/2,-Y+3/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e1n8zA2	C:x,y,z->A:X-1/2,-Y+3/2,-Z+1	Immunoglobulin-related	Interaction Interface Pymol