ECOD: domain e1nfkB2

Domain ID e1nfkB2

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Common fold of diphtheria toxin/transcription factors/cytochrome f
F: RHD_DNA_bind

UID:	000041197
Type:	Automatic domain
Parent:	e1p7hL2
Range:	B:39-246
PDB:	1nfk
PDB Description:	PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
UniProt:	P25799
Hsap BLAST neighbor:	P19838
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e1nfkB2	B:39-246	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1nfkB1	B:251-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1nfkA2	A:39-246	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1nfkA1	A:251-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1nfkB2	B:39-246	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1nfkB1	B:251-350	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1nfkB2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1nfkA1	B:x,y,z->A:X-1/2,Y-1/2,Z	Immunoglobulin-related	Interaction Interface Pymol
e1nfkB2	B:x,y,z->B:-X,Y,-Z+1	Immunoglobulin-related	Interaction Interface Pymol
e1nfkB2	B:-X,Y,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol