Domain ID e1njfA4

Download files:
  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DNA_pol3_delta2
UID: 001002409
Type: Manual and representative domain
Range: A:5-63,A:86-176
Ligands: AGS ZN
PDB: 1njf
PDB Description: DNA polymerase III subunit gamma
UniProt: P06710
Hsap BLAST neighbor: P40937
Species: Escherichia coli

Structure of domain e1njfA4

Domains in the same chain:

Download Pymol

e1njfA4 A:5-63,A:86-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1njfA2 A:64-85 Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits
e1njfA3 A:177-243 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e1njfA4 A:5-63,A:86-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1njfA2 A:64-85 Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits
e1njfA3 A:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1njfB1 B:5-63,B:86-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1njfB2 B:64-85 Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits
e1njfB4 B:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1njfC1 C:5-63,C:86-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1njfC2 C:64-85 Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits
e1njfC4 C:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1njfD3 D:5-63,D:86-176 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1njfD2 D:64-85 Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits Zn-binding domain in DNA polymerase III subunits
e1njfD4 D:177-243 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e1njfA4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1njfB4 A:X,Y,Z->B:x,y,z Histone-related Interaction Interface Pymol
e1njfB4 A:X,Y,Z->B:x,y,z Histone-related Interaction Interface Pymol
e1njfC4 A:x,y,z->C:-X+1,Y-1/2,-Z+1/2 Histone-related Interaction Interface Pymol
e1njfC4 A:X,Y,Z->C:x,y,z Histone-related Interaction Interface Pymol
e1njfC4 A:x,y,z->D:-X+1,Y-1/2,-Z+1/2 Histone-related Interaction Interface Pymol
e1njfD4 A:X,Y,Z->D:x,y,z Histone-related Interaction Interface Pymol
e1njfA3 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Histone-related Interaction Interface Pymol
e1njfA3 A:x,y,z->D:X-1/2,-Y+1/2,-Z+1 Histone-related Interaction Interface Pymol