Domain ID e1nk0A1

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  • A: alpha arrays
  • X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I
  • F: DNA_pol_A
UID: 000047513
Type: Automatic domain
Parent: e2hhvA1
Range: A:668-791
Ligands: MES SO4
PDB: 1nk0
PDB Description: DNA POLYMERASE I
UniProt: P52026
Hsap BLAST neighbor: O75417
Species: Geobacillus stearothermophilus

Structure of domain e1nk0A1

Structural contacts of domain e1nk0A1 of H-group "helical bundle in Bacillus stearothermophilus-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nk0A3 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1nk0A4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1nk0A4 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1nk0A3 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1nk0A2 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1nk0A2 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol