| UID: | 000027567 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1iegA1 |
| Range: | B:309-556 |
| PDB: | 1nkk |
| PDB Description: | Capsid protein P40 |
| UniProt: | P16753 |
| Species: | Human herpesvirus 5 |
Structure of domain e1nkkB1
Domains in the same chain:
| e1nkkB1 | B:309-556 | Herpes virus serine proteinase, assemblin | Herpes virus serine proteinase, assemblin | Herpes virus serine proteinase, assemblin |
Domains in the same PDB:
Structural contacts of domain e1nkkB1 of H-group "Herpes virus serine proteinase, assemblin":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1nkkA1 | B:x,y,z->A:X,Y,Z | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkC1 | B:x,y,z->C:-X+1/2,Y-1/2,-Z | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkA1 | B:x,y,z->A:X,Y,Z-1 | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkD1 | B:X-1/2,-Y+1/2,-Z->D:x,y,z | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkA1 | B:X-1/2,-Y+1/2,-Z->A:x,y,z | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkB1 | B:x,y,z->B:X,Y,Z-1 | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
| e1nkkB1 | B:X,Y,Z-1->B:x,y,z | Herpes virus serine proteinase, assemblin | Interaction Interface Pymol |
