Domain ID e1nktB2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: SecA_DEAD
UID: 001544625
Type: Automatic domain
Parent: e1tf5A3
Range: B:-15-245,B:350-397
Ligands: ADP MG
PDB: 1nkt
PDB Description: Preprotein translocase secA 1 subunit
UniProt: P9WGP5
Species: Mycobacterium tuberculosis

Structure of domain e1nktB2

Domains in the same chain:

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e1nktB2 B:-15-245,B:350-397 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktB4 B:246-349 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e1nktB3 B:398-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktB1 B:616-835 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Domains in the same PDB:

e1nktA3 A:-15-245,A:350-397 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktA5 A:246-349 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e1nktA4 A:398-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktA2 A:616-835 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA
e1nktB2 B:-15-245,B:350-397 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktB4 B:246-349 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e1nktB3 B:398-615 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1nktB1 B:616-835 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Structural contacts of domain e1nktB2 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nktB1 B:x,y,z->B:-X+1,-Y+1,Z Helical scaffold and wing domains of SecA Interaction Interface Pymol
e1nktB2 B:x,y,z->B:-X+1,-Y+1,Z P-loop domains-related Interaction Interface Pymol
e1nktB2 B:-X+1,-Y+1,Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1nktB1 B:-X+1,-Y+1,Z->B:x,y,z Helical scaffold and wing domains of SecA Interaction Interface Pymol
e1nktB4 B:x,y,z->B:-X+Y+1,Y,-Z+1 Pre-protein crosslinking domain of SecA Interaction Interface Pymol
e1nktB2 B:x,y,z->B:-X+Y+1,Y,-Z+1 P-loop domains-related Interaction Interface Pymol
e1nktB2 B:-X+Y+1,Y,-Z+1->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1nktB4 B:-X+Y+1,Y,-Z+1->B:x,y,z Pre-protein crosslinking domain of SecA Interaction Interface Pymol