ECOD: domain e1nlqA1

Domain ID e1nlqA1

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Nucleoplasmin

UID:	000001198
Type:	Manual and representative domain
Range:	A:3-107
Ligands:	MG
PDB:	1nlq
PDB Description:	Nucleoplasmin-like protein
UniProt:	Q27415
Hsap BLAST neighbor:	O75607
Species:	Drosophila melanogaster

Domains in the same chain:

Download Pymol

e1nlqA1	A:3-107	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e1nlqA1	A:3-107	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1nlqB1	B:4-105	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1nlqC1	C:4-105	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1nlqD1	D:4-104	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1nlqE1	E:4-105	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e1nlqA1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1nlqE1	A:X,Y,Z->E:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1nlqB1	A:X,Y,Z->B:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1nlqA1	A:x,y,z->A:-X,Y-1/2,-Z+1	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1nlqA1	A:-X,Y-1/2,-Z+1->A:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1nlqE1	A:-X,Y-1/2,-Z+1->E:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1nlqD1	A:x,y,z->D:-X,Y-1/2,-Z+2	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol