ECOD: domain e1nneB3

Domain ID e1nneB3

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: MutS_V

UID:	000102591
Type:	Automatic domain
Parent:	e1wb9A3
Range:	B:1542-1765
Ligands:	ADP BEF EDO SO4
PDB:	1nne
PDB Description:	DNA Mismatch Repair protein MutS
UniProt:	Q56215
Hsap BLAST neighbor:	P43246
Species:	Thermus aquaticus

Domain
In chain context
In PDB context

Structure of domain e1nneB3

Domains in the same chain:

Download Pymol

e1nneB2	B:1001-1120	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e1nneB4	B:1121-1266	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1nneB1	B:1267-1541	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e1nneB3	B:1542-1765	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1nneA2	A:1-120	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e1nneA4	A:121-266	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1nneA1	A:267-541	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e1nneA3	A:542-765	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1nneB2	B:1001-1120	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e1nneB4	B:1121-1266	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1nneB1	B:1267-1541	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e1nneB3	B:1542-1765	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1nneB3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1nneA1	B:x,y,z->A:X,Y,Z	DNA repair protein MutS, domain III	Interaction Interface Pymol
e1nneA3	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1nneA4	B:x,y,z->A:X-1/2,-Y+3/2,-Z+1	Ribonuclease H-like	Interaction Interface Pymol
e1nneA2	B:x,y,z->A:X-1/2,-Y+3/2,-Z+1	DNA repair protein MutS, domain I	Interaction Interface Pymol
e1nneA2	B:x,y,z->A:X-1,Y,Z	DNA repair protein MutS, domain I	Interaction Interface Pymol
e1nneA1	B:x,y,z->A:X-1,Y,Z	DNA repair protein MutS, domain III	Interaction Interface Pymol