Domain ID e1nomA2

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000078032
Type: Automatic domain
Parent: e2fmpA3
Range: A:149-335
Ligands: MN
PDB: 1nom
PDB Description: DNA POLYMERASE BETA
UniProt: P06766
Hsap BLAST neighbor: P06746
Species: Rattus norvegicus

Structure of domain e1nomA2

Structural contacts of domain e1nomA2 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nomA2 A:x,y,z->A:-X,-Y,Z Nucleotidyltransferase Interaction Interface Pymol
e1nomA2 A:-X,-Y,Z->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e1nomA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 SAM/DNA-glycosylase Interaction Interface Pymol
e1nomA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 Nucleotidyltransferase Interaction Interface Pymol
e1nomA2 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e1nomA1 A:x,y,z->A:-X,-Y+1,Z SAM/DNA-glycosylase Interaction Interface Pymol
e1nomA1 A:-X,-Y+1,Z->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e1nomA2 A:x,y,z->A:X,Y,Z-1 Nucleotidyltransferase Interaction Interface Pymol
e1nomA2 A:X,Y,Z-1->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol