ECOD: domain e1o4xB1

Domain ID e1o4xB1

FASTA
Coordinates
Conservation
Pymol

A: alpha arrays
X: HMG-box
H: HMG-box
T: HMG-box
F: HMG_box

UID:	000044939
Type:	Automatic domain
Parent:	e1j3dA1
Range:	B:206-282
PDB:	1o4x
PDB Description:	Transcription factor SOX-2
UniProt:	P48431
Hsap BLAST neighbor:	P48431
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1o4xB1

Domains in the same chain:

Download Pymol

e1o4xB1	B:206-282	HMG-box	HMG-box	HMG-box

Domains in the same PDB:

e1o4xA2	A:5-79	HTH	HTH	tetra-helical, lambda repressor-like
e1o4xA1	A:110-163	HTH	HTH	tri-helical
e1o4xB1	B:206-282	HMG-box	HMG-box	HMG-box

Structural contacts of domain e1o4xB1 of H-group "HMG-box":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1o4xA2	B:X,Y,Z->A:x,y,z	HTH	Interaction Interface Pymol