ECOD: domain e1ocrY1

Domain ID e1ocrY1

A: extended segments
X: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
F: COX7C

UID:	000060978
Type:	Automatic domain
Parent:	e1v54L1
Range:	Y:2-47
PDB:	1ocr
PDB Description:	CYTOCHROME C OXIDASE
UniProt:	P00430
Hsap BLAST neighbor:	P15954
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e1ocrY1

Domains in the same chain:

Download Pymol

e1ocrY1	Y:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)

Domains in the same PDB:

Structural contacts of domain e1ocrY1 of H-group "Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ocrN1	Y:x,y,z->N:X,Y,Z	Cytochrome c oxidase subunit I-like	Interaction Interface Pymol
e1ocrZ1	Y:X,Y,Z->Z:x,y,z	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Interaction Interface Pymol
e1ocrW1	Y:x,y,z->W:X,Y,Z	Mitochondrial cytochrome c oxidase subunit VIIa	Interaction Interface Pymol
e1ocrP1	Y:x,y,z->P:X,Y,Z	Cytochrome c oxidase subunit III-like	Interaction Interface Pymol

e1ocrA1	A:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e1ocrB2	B:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e1ocrB1	B:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e1ocrC1	C:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e1ocrD1	D:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e1ocrE1	E:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e1ocrF1	F:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e1ocrG1	G:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e1ocrH1	H:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e1ocrI1	I:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e1ocrJ1	J:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e1ocrK1	K:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e1ocrL1	L:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocrM1	M:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e1ocrN1	N:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e1ocrO2	O:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e1ocrO1	O:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e1ocrP1	P:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e1ocrQ1	Q:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e1ocrR1	R:5-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e1ocrS1	S:1-98	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e1ocrT1	T:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e1ocrU1	U:7-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e1ocrV1	V:1-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e1ocrW1	W:1-58	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e1ocrX1	X:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e1ocrY1	Y:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocrZ1	Z:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)