Domain ID e1oczS1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Cytochrome c oxidase Subunit F
  • F: COX5B
UID: 000089248
Type: Automatic domain
Parent: e1v54F1
Range: S:1-98
Ligands: ZN
PDB: 1ocz
PDB Description: CYTOCHROME C OXIDASE
UniProt: P00428
Hsap BLAST neighbor: P10606
Species: Bos taurus

Structure of domain e1oczS1

Domains in the same chain:

e1oczS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F

Domains in the same PDB:

e1oczA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1oczB2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1oczB1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1oczC1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1oczD1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1oczE1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1oczF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1oczG1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1oczH1 H:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1oczI1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1oczJ1 J:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1oczK1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1oczL1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1oczM1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e1oczN1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1oczO2 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1oczO1 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1oczP1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1oczQ1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1oczR1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1oczS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1oczT1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1oczU1 U:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1oczV1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1oczW1 W:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1oczX1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1oczY1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1oczZ1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e1oczS1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1oczN1 S:x,y,z->N:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e1oczP1 S:x,y,z->P:X,Y,Z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e1oczR1 S:x,y,z->R:X,Y,Z Cytochrome c oxidase subunit E Interaction Interface Pymol
e1oczQ1 S:x,y,z->Q:X,Y,Z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e1oczW1 S:X,Y,Z->W:x,y,z Mitochondrial cytochrome c oxidase subunit VIIa Interaction Interface Pymol
e1oczF1 S:x,y,z->F:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e1oczA1 S:x,y,z->A:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e1oczG1 S:X,Y,Z->G:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol