Domain ID e1odiD1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000105965
Type: Automatic domain
Parent: e3pnpA1
Range: D:2-235
Ligands: ADN SO4
PDB: 1odi
PDB Description: PURINE NUCLEOSIDE PHOSPHORYLASE
UniProt: Q5SID9
Species:

Structure of domain e1odiD1

Structural contacts of domain e1odiD1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1odiC1 D:x,y,z->C:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiE1 D:X,Y,Z->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiF1 D:x,y,z->F:-X+1/2,Y-1/2,-Z-5/4 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiD1 D:x,y,z->D:-Y-1,-X-1,-Z-3/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiD1 D:-Y-1,-X-1,-Z-3/2->D:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiB1 D:X-1/2,-Y-3/2,-Z-7/4->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1odiC1 D:x,y,z->C:-Y-1,-X-1,-Z-3/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol