ECOD: domain e1odkB1

Domain ID e1odkB1

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Peptidyl-tRNA hydrolase-like
T: Peptidyl-tRNA hydrolase-like
F: PNP_UDP_1

UID:	000105968
Type:	Automatic domain
Parent:	e3pnpA1
Range:	B:2-235
Ligands:	GOL
PDB:	1odk
PDB Description:	PURINE NUCLEOSIDE PHOSPHORYLASE
UniProt:	Q5SID9
Species:

Domains in the same chain:

Download Pymol

e1odkB1	B:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

Structural contacts of domain e1odkB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1odkA1	B:x,y,z->A:X,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1odkC1	B:X,Y,Z->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1odkE1	B:x,y,z->E:X-1/2,-Y-3/2,-Z-7/4	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1odkC1	B:Y+1,X-1,-Z-2->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1odkD1	B:x,y,z->D:X-1/2,-Y-3/2,-Z-7/4	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol

e1odkA1	A:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1odkB1	B:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1odkC1	C:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1odkD1	D:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1odkE1	E:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1odkF1	F:2-235	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like