Domain ID e1ohfB1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Peptidase_A21
UID: 001874263
Type: Automatic domain
Parent: e1ohfA2
Range: B:44-276,B:417-590
Ligands: MG
PDB: 1ohf
PDB Description: NUDAURELIA CAPENSIS OMEGA VIRUS CAPSID PROTEIN
UniProt: Q4TVT6
Species: Nudaurelia capensis omega virus

Structure of domain e1ohfB1

Domains in the same chain:

e1ohfB1 B:44-276,B:417-590 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1ohfB2 B:277-416 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein

Domains in the same PDB:

e1ohfA2 A:61-276,A:417-599 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1ohfA3 A:277-416 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e1ohfB1 B:44-276,B:417-590 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1ohfB2 B:277-416 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e1ohfC3 C:42-277,C:416-641 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1ohfC2 C:277-415 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein
e1ohfD2 D:43-277,D:416-641 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1ohfD1 D:277-415 Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein Insertion domain in tetravirus coat protein

Structural contacts of domain e1ohfB1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ohfA2 B:X,Y,Z->C:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1ohfC2 B:X,Y,Z->C:x,y,z Insertion domain in tetravirus coat protein Interaction Interface Pymol
e1ohfA2 B:x,y,z->A:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol