Domain ID e1ojyB4

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  • A: few secondary structure elements
  • X: EGF-like
  • H: EGF-related
  • T: Complement control module/SCR domain
  • F: Sushi
UID: 000091647
Type: Automatic domain
Parent: e2q7zA1
Range: B:65-128
PDB: 1ojy
PDB Description: COMPLEMENT DECAY-ACCELERATING FACTOR
UniProt: P08174
Hsap BLAST neighbor: P08174
Species: Homo sapiens

Structure of domain e1ojyB4

Domains in the same chain:

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e1ojyB3 B:2-64 EGF-like EGF-related Complement control module/SCR domain
e1ojyB4 B:65-128 EGF-like EGF-related Complement control module/SCR domain
e1ojyB1 B:129-190 EGF-like EGF-related Complement control module/SCR domain
e1ojyB2 B:191-253 EGF-like EGF-related Complement control module/SCR domain

Domains in the same PDB:

e1ojyA3 A:2-64 EGF-like EGF-related Complement control module/SCR domain
e1ojyA4 A:65-128 EGF-like EGF-related Complement control module/SCR domain
e1ojyA1 A:129-190 EGF-like EGF-related Complement control module/SCR domain
e1ojyA2 A:191-253 EGF-like EGF-related Complement control module/SCR domain
e1ojyB3 B:2-64 EGF-like EGF-related Complement control module/SCR domain
e1ojyB4 B:65-128 EGF-like EGF-related Complement control module/SCR domain
e1ojyB1 B:129-190 EGF-like EGF-related Complement control module/SCR domain
e1ojyB2 B:191-253 EGF-like EGF-related Complement control module/SCR domain
e1ojyC3 C:1-64 EGF-like EGF-related Complement control module/SCR domain
e1ojyC4 C:65-128 EGF-like EGF-related Complement control module/SCR domain
e1ojyC1 C:129-190 EGF-like EGF-related Complement control module/SCR domain
e1ojyC2 C:191-253 EGF-like EGF-related Complement control module/SCR domain
e1ojyD3 D:2-64 EGF-like EGF-related Complement control module/SCR domain
e1ojyD4 D:65-128 EGF-like EGF-related Complement control module/SCR domain
e1ojyD1 D:129-190 EGF-like EGF-related Complement control module/SCR domain
e1ojyD2 D:191-253 EGF-like EGF-related Complement control module/SCR domain

Structural contacts of domain e1ojyB4 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ojyD4 B:X-2,Y,Z+1->D:x,y,z EGF-related Interaction Interface Pymol
e1ojyC3 B:X-2,Y,Z+1->C:x,y,z EGF-related Interaction Interface Pymol
e1ojyA2 B:X-1,Y,Z->A:x,y,z EGF-related Interaction Interface Pymol
e1ojyA2 B:x,y,z->A:X,Y,Z EGF-related Interaction Interface Pymol