ECOD: domain e1okkA2

Domain ID e1okkA2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: SRP54

UID:	000102051
Type:	Automatic domain
Parent:	e1ls1A2
Range:	A:89-293
Ligands:	BZP EDO GCP MG SO4
PDB:	1okk
PDB Description:	SIGNAL RECOGNITION PARTICLE PROTEIN
UniProt:	O07347
Hsap BLAST neighbor:	P61011
Species:	Thermus aquaticus

Domain
In chain context
In PDB context

Structure of domain e1okkA2

Domains in the same chain:

Download Pymol

e1okkA1	A:4-88	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1okkA2	A:89-293	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1okkA1	A:4-88	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1okkA2	A:89-293	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1okkD1	D:21-78	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1okkD2	D:97-303	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1okkA2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1okkA1	A:-Y+3/2,X+1/2,Z+1/4->A:x,y,z	Domain of the SRP/SRP receptor G-proteins	Interaction Interface Pymol
e1okkA2	A:x,y,z->A:-Y+2,-X+2,-Z+3/2	P-loop domains-related	Interaction Interface Pymol
e1okkA2	A:-Y+2,-X+2,-Z+3/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol