ECOD: domain e1opoC2

Domain ID e1opoC2

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Viral_coat

UID:	001724852
Type:	Automatic domain
Parent:	e1opoA2
Range:	C:81-246
Ligands:	CA SO4
PDB:	1opo
PDB Description:	COAT PROTEIN
UniProt:	P04383
Species:	Carnation mottle virus

Domains in the same chain:

Download Pymol

e1opoC2	C:81-246	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1opoC1	C:247-348	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain

Domains in the same PDB:

e1opoA2	A:82-246	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1opoA3	A:247-348	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain
e1opoB2	B:82-246	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1opoB1	B:247-348	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain
e1opoC2	C:81-246	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e1opoC1	C:247-348	jelly-roll	ssRNA positive-strand viruses coat protein P (projecting) domain	ssRNA positive-strand viruses coat protein P (projecting) domain

Structural contacts of domain e1opoC2 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1opoC2	C:x,y,z->C:-X,-Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1opoC2	C:-X,-Y,Z->C:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1opoB2	C:x,y,z->B:-X,-Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1opoA2	C:x,y,z->A:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e1opoB2	C:x,y,z->B:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol