ECOD: domain e1oqeP1

Domain ID e1oqeP1

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: TNF receptor-like
F: BaffR-Tall_bind

UID:	000091761
Type:	Automatic domain
Parent:	e1oqeK1
Range:	P:1-31
PDB:	1oqe
PDB Description:	Tumor necrosis factor receptor superfamily member 13C
UniProt:	Q96RJ3
Hsap BLAST neighbor:	Q96RJ3
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1oqeP1

Domains in the same chain:

Download Pymol

e1oqeP1	P:1-31	EGF-like	EGF-related	TNF receptor-like

Domains in the same PDB:

e1oqeA1	A:1-144	jelly-roll	TNF-like	TNF-like
e1oqeB1	B:1-144	jelly-roll	TNF-like	TNF-like
e1oqeC1	C:1-144	jelly-roll	TNF-like	TNF-like
e1oqeD1	D:1-144	jelly-roll	TNF-like	TNF-like
e1oqeE1	E:1-144	jelly-roll	TNF-like	TNF-like
e1oqeF1	F:1-144	jelly-roll	TNF-like	TNF-like
e1oqeG1	G:1-144	jelly-roll	TNF-like	TNF-like
e1oqeH1	H:1-144	jelly-roll	TNF-like	TNF-like
e1oqeI1	I:1-144	jelly-roll	TNF-like	TNF-like
e1oqeJ1	J:1-144	jelly-roll	TNF-like	TNF-like
e1oqeK1	K:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeL1	L:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeM1	M:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeN1	N:1-24	EGF-like	EGF-related	TNF receptor-like
e1oqeO1	O:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeP1	P:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeQ1	Q:1-31	EGF-like	EGF-related	TNF receptor-like
e1oqeR1	R:1-31	EGF-like	EGF-related	TNF receptor-like

Structural contacts of domain e1oqeP1 of H-group "EGF-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1oqeG1	P:x,y,z->G:X,Y,Z	TNF-like	Interaction Interface Pymol
e1oqeH1	P:x,y,z->H:X,Y,Z	TNF-like	Interaction Interface Pymol
e1oqeC1	P:x,y,z->C:X,Y,Z	TNF-like	Interaction Interface Pymol