Domain ID e1ovmB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 000110919
Type: Automatic domain
Parent: e1pvdA3
Range: B:356-551
Ligands: MG TPP
PDB: 1ovm
PDB Description: INDOLE-3-PYRUVATE DECARBOXYLASE
UniProt: P23234
Species: Enterobacter cloacae

Structure of domain e1ovmB3

Domains in the same chain:

e1ovmB2 B:3-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmB1 B:181-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1ovmB3 B:356-551 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e1ovmA2 A:3-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmA1 A:181-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1ovmA3 A:356-551 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmB2 B:3-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmB1 B:181-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1ovmB3 B:356-551 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmC2 C:3-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmC1 C:181-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1ovmC3 C:356-551 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmD2 D:3-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1ovmD1 D:181-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1ovmD3 D:356-551 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e1ovmB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ovmA2 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1ovmA3 B:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1ovmA2 B:X-1/2,-Y+1/2,-Z+1->A:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1ovmA1 B:X-1/2,-Y+1/2,-Z+1->A:x,y,z Rossmann-related Interaction Interface Pymol
e1ovmC1 B:X-1/2,-Y+1/2,-Z+1->C:x,y,z Rossmann-related Interaction Interface Pymol
e1ovmD3 B:X,Y,Z-1->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol