ECOD: domain e1oy5C1

Domain ID e1oy5C1

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: tRNA_m1G_MT

UID:	000113954
Type:	Automatic domain
Parent:	e1ualA1
Range:	C:604-835
PDB:	1oy5
PDB Description:	TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE
UniProt:	O67463
Species:	Aquifex aeolicus

Domains in the same chain:

Download Pymol

e1oy5C1	C:604-835	alpha/beta knot	alpha/beta knot	alpha/beta knot

Domains in the same PDB:

e1oy5A1	A:4-235	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1oy5B1	B:304-535	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1oy5C1	C:604-835	alpha/beta knot	alpha/beta knot	alpha/beta knot

Structural contacts of domain e1oy5C1 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1oy5A1	C:x,y,z->A:X,Y,Z	alpha/beta knot	Interaction Interface Pymol
e1oy5B1	C:x,y,z->B:-X,Y-1,-Z+1	alpha/beta knot	Interaction Interface Pymol
e1oy5A1	C:-X-1/2,Y-1/2,-Z->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1oy5A1	C:X,Y,Z-1->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1oy5C1	C:x,y,z->C:X,Y,Z-1	alpha/beta knot	Interaction Interface Pymol
e1oy5C1	C:X,Y,Z-1->C:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1oy5B1	C:x,y,z->B:X,Y,Z	alpha/beta knot	Interaction Interface Pymol