Domain ID e1p9sB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 001103641
Type: Automatic domain
Parent: e2ducA2
Range: B:1-185
Ligands: DIO
PDB: 1p9s
PDB Description: Replicase polyprotein 1ab
UniProt: P0C6U2
Species: Human coronavirus 229E

Structure of domain e1p9sB1

Structural contacts of domain e1p9sB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1p9sA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1p9sA2 B:x,y,z->A:X,Y,Z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e1p9sA1 B:x,y,z->A:-X+1,Y-1/2,-Z RIFT-related Interaction Interface Pymol
e1p9sB1 B:x,y,z->B:-X+2,Y-1/2,-Z RIFT-related Interaction Interface Pymol
e1p9sB2 B:-X+2,Y-1/2,-Z->B:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e1p9sB1 B:-X+2,Y-1/2,-Z->B:x,y,z RIFT-related Interaction Interface Pymol
e1p9sA1 B:X-1,Y,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e1p9sA2 B:-X+1,Y-1/2,-Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol