Domain ID e1pb8A2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001522110
Type: Automatic domain
Parent: e1pb7A3
Range: A:4-143,A:249-292
Ligands: DSN
PDB: 1pb8
PDB Description: N-methyl-D-aspartate Receptor Subunit 1
UniProt: P35439
Hsap BLAST neighbor: Q05586
Species: Rattus norvegicus

Structure of domain e1pb8A2

Structural contacts of domain e1pb8A2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pb8A2 A:x,y,z->A:X-1/2,-Y+3/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A2 A:X-1/2,-Y+3/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A1 A:X-1/2,-Y+3/2,-Z+1->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A2 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A2 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A2 A:x,y,z->A:X-1,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A1 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A2 A:X-1,Y,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e1pb8A1 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 Periplasmic binding protein-like II Interaction Interface Pymol