Domain ID e1pgrG1

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  • A: alpha bundles
  • X: Ferritin/Heme oxygenase/4-helical cytokines
  • H: 4-helical cytokines
  • T: 4-helical cytokines
  • F: GCSF
UID: 000056646
Type: Automatic domain
Parent: e1bgcA1
Range: G:9-173
PDB: 1pgr
PDB Description: PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR)
UniProt: P09919
Hsap BLAST neighbor: P09919
Species: Homo sapiens

Structure of domain e1pgrG1

Domains in the same chain:

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e1pgrG1 G:9-173 Ferritin/Heme oxygenase/4-helical cytokines 4-helical cytokines 4-helical cytokines

Domains in the same PDB:

e1pgrA1 A:9-173 Ferritin/Heme oxygenase/4-helical cytokines 4-helical cytokines 4-helical cytokines
e1pgrB1 B:1-106 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrB2 B:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrC1 C:9-173 Ferritin/Heme oxygenase/4-helical cytokines 4-helical cytokines 4-helical cytokines
e1pgrD3 D:3-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrD1 D:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrE1 E:9-173 Ferritin/Heme oxygenase/4-helical cytokines 4-helical cytokines 4-helical cytokines
e1pgrF1 F:1-106 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrF2 F:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrG1 G:9-173 Ferritin/Heme oxygenase/4-helical cytokines 4-helical cytokines 4-helical cytokines
e1pgrH3 H:3-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1pgrH2 H:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1pgrG1 of H-group "4-helical cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1bgcA1 G:X,Y,Z->H:x,y,z 4-helical cytokines Interaction Interface Pymol
e1pgrH3 G:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1pgrE1 G:x,y,z->E:-Y+3/2,X-1/2,Z-1/4 4-helical cytokines Interaction Interface Pymol
e1pgrC1 G:-Y+3/2,X-1/2,Z-1/4->C:x,y,z 4-helical cytokines Interaction Interface Pymol
e1pgrC1 G:-Y+3/2,X-1/2,Z-1/4->B:x,y,z 4-helical cytokines Interaction Interface Pymol
e1pgrC1 G:X,Y,Z->F:x,y,z 4-helical cytokines Interaction Interface Pymol
e1pgrA1 G:-Y+3/2,X-1/2,Z-1/4->A:x,y,z 4-helical cytokines Interaction Interface Pymol