Domain ID e1pjsB3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: NAD_binding_7
UID: 000097972
Type: Automatic domain
Parent: e1pjqA3
Range: B:1-113
Ligands: NAD
PDB: 1pjs
PDB Description: Siroheme synthase
UniProt: P25924
Species:

Structure of domain e1pjsB3

Domains in the same chain:

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e1pjsB3 B:1-113 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1pjsB5 B:114-147 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1pjsB1 B:147-214 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1pjsB2 B:216-330 Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain
e1pjsB4 B:331-457 Tetrapyrrole methylase C-terminal domain-like Tetrapyrrole methylase C-terminal domain Tetrapyrrole methylase C-terminal domain

Domains in the same PDB:

e1pjsA3 A:1-113 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1pjsA5 A:114-147 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1pjsA1 A:147-214 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1pjsA6 A:216-330 Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain
e1pjsA2 A:331-457 Tetrapyrrole methylase C-terminal domain-like Tetrapyrrole methylase C-terminal domain Tetrapyrrole methylase C-terminal domain
e1pjsB3 B:1-113 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1pjsB5 B:114-147 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1pjsB1 B:147-214 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1pjsB2 B:216-330 Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain Tetrapyrrole methylase N-terminal domain
e1pjsB4 B:331-457 Tetrapyrrole methylase C-terminal domain-like Tetrapyrrole methylase C-terminal domain Tetrapyrrole methylase C-terminal domain

Structural contacts of domain e1pjsB3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pjsA6 B:x,y,z->A:X,Y,Z Tetrapyrrole methylase N-terminal domain Interaction Interface Pymol
e1pjsA3 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e1pjsA5 B:x,y,z->A:X,Y,Z SSH domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1pjsA2 B:x,y,z->A:-X-3/2,-Y+2,Z-1/2 Tetrapyrrole methylase C-terminal domain Interaction Interface Pymol
e1pjsA6 B:x,y,z->A:X-1,Y,Z Tetrapyrrole methylase N-terminal domain Interaction Interface Pymol