Domain ID e1pk6B1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: TNF-like
  • T: TNF-like
  • F: C1q
UID: 000031378
Type: Automatic domain
Parent: e1c3hA1
Range: B:92-223
Ligands: CA
PDB: 1pk6
PDB Description: Complement C1q subcomponent, B chain precursor
UniProt: P02746
Hsap BLAST neighbor: P02746
Species: Homo sapiens

Structure of domain e1pk6B1

Domains in the same chain:

e1pk6B1 B:92-223 jelly-roll TNF-like TNF-like

Domains in the same PDB:

e1pk6A1 A:90-222 jelly-roll TNF-like TNF-like
e1pk6B1 B:92-223 jelly-roll TNF-like TNF-like
e1pk6C1 C:89-217 jelly-roll TNF-like TNF-like

Structural contacts of domain e1pk6B1 of H-group "TNF-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pk6A1 B:x,y,z->A:X,Y,Z TNF-like Interaction Interface Pymol
e1pk6C1 B:X,Y,Z->C:x,y,z TNF-like Interaction Interface Pymol
e1pk6B1 B:x,y,z->B:-X+1,Y,-Z+1 TNF-like Interaction Interface Pymol
e1pk6B1 B:-X+1,Y,-Z+1->B:x,y,z TNF-like Interaction Interface Pymol
e1pk6A1 B:x,y,z->A:X-1/2,Y+1/2,Z TNF-like Interaction Interface Pymol
e1pk6C1 B:X,Y-1,Z->C:x,y,z TNF-like Interaction Interface Pymol
e1pk6A1 B:x,y,z->A:X-1/2,Y-1/2,Z TNF-like Interaction Interface Pymol
e1pk6B1 B:x,y,z->B:X,Y-1,Z TNF-like Interaction Interface Pymol
e1pk6B1 B:X,Y-1,Z->B:x,y,z TNF-like Interaction Interface Pymol