ECOD: domain e1pk9B1

Domain ID e1pk9B1

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Peptidyl-tRNA hydrolase-like
T: Peptidyl-tRNA hydrolase-like
F: PNP_UDP_1

UID:	000105875
Type:	Automatic domain
Parent:	e3pnpA1
Range:	B:1-237
Ligands:	2FA PO4
PDB:	1pk9
PDB Description:	Purine nucleoside phosphorylase DeoD-type
UniProt:	P0ABP9
Species:

Domains in the same chain:

Download Pymol

e1pk9B1	B:1-237	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Domains in the same PDB:

e1pk9A1	A:1-237	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1pk9B1	B:1-237	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like
e1pk9C1	C:1-237	Phosphorylase/hydrolase-like	Peptidyl-tRNA hydrolase-like	Peptidyl-tRNA hydrolase-like

Structural contacts of domain e1pk9B1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1pk9A1	B:x,y,z->A:X,X-Y,-Z+1/6	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9C1	B:X,X-Y,-Z+1/6->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9B1	B:x,y,z->B:-Y+1,-X+1,-Z-1/6	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9B1	B:-Y+1,-X+1,-Z-1/6->B:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9A1	B:x,y,z->A:X,Y,Z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9C1	B:X,Y,Z->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9C1	B:-Y+1,X-Y,Z+1/3->C:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol
e1pk9A1	B:X-Y+1,X,Z+1/6->A:x,y,z	Peptidyl-tRNA hydrolase-like	Interaction Interface Pymol