ECOD: domain e1pkxD3

Domain ID e1pkxD3

A: a+b three layers
X: Cytidine deaminase-like
H: Cytidine deaminase-like
T: Cytidine deaminase-like
F: AICARFT_IMPCHas

UID:	001202108
Type:	Automatic domain
Parent:	e1g8mA4
Range:	D:391-592
Ligands:	K
PDB:	1pkx
PDB Description:	BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH
UniProt:	P31939
Hsap BLAST neighbor:	P31939
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1pkxD3

Domains in the same chain:

Download Pymol

e1pkxD1	D:4-200	Methylglyoxal synthase-like	Methylglyoxal synthase-like	Methylglyoxal synthase-like
e1pkxD4	D:200-390	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxD3	D:391-592	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like

Domains in the same PDB:

e1pkxA1	A:3-200	Methylglyoxal synthase-like	Methylglyoxal synthase-like	Methylglyoxal synthase-like
e1pkxA4	A:200-390	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxA3	A:391-592	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxB1	B:4-200	Methylglyoxal synthase-like	Methylglyoxal synthase-like	Methylglyoxal synthase-like
e1pkxB4	B:200-390	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxB3	B:391-592	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxC1	C:4-200	Methylglyoxal synthase-like	Methylglyoxal synthase-like	Methylglyoxal synthase-like
e1pkxC4	C:200-390	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxC3	C:391-592	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxD1	D:4-200	Methylglyoxal synthase-like	Methylglyoxal synthase-like	Methylglyoxal synthase-like
e1pkxD4	D:200-390	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e1pkxD3	D:391-592	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like

Structural contacts of domain e1pkxD3 of H-group "Cytidine deaminase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1pkxC4	D:x,y,z->C:X,Y,Z	Cytidine deaminase-like	Interaction Interface Pymol
e1pkxC3	D:x,y,z->C:X,Y,Z	Cytidine deaminase-like	Interaction Interface Pymol
e1pkxD1	D:x,y,z->D:-X+2,Y-1/2,-Z	Methylglyoxal synthase-like	Interaction Interface Pymol
e1pkxD1	D:x,y,z->D:-X+1,Y-1/2,-Z	Methylglyoxal synthase-like	Interaction Interface Pymol
e1pkxC1	D:x,y,z->C:X-1,Y,Z	Methylglyoxal synthase-like	Interaction Interface Pymol