Domain ID e1pmmE2

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Pyridoxal_deC
UID: 001151930
Type: Automatic domain
Parent: e1js3A2
Range: E:4-336
Ligands: ACY PLP
PDB: 1pmm
PDB Description: GLUTAMATE DECARBOXYLASE BETA
UniProt: P69910
Hsap BLAST neighbor: O95470
Species: Escherichia coli

Structure of domain e1pmmE2

Domains in the same chain:

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e1pmmE2 E:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmE3 E:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e1pmmA2 A:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmA1 A:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmmB2 B:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmB3 B:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmmC2 C:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmC3 C:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmmD2 D:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmD3 D:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmmE2 E:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmE3 E:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmmF2 F:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmmF3 F:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e1pmmE2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pmmF2 E:X,Y,Z->F:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmmF3 E:X,Y,Z->F:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmmD2 E:x,y,z->D:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1pmmD3 E:x,y,z->D:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmmA2 E:x,y,z->A:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1pmmA1 E:x,y,z->A:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmmC2 E:x,y,z->C:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1pmmC2 E:X-1,Y,Z->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmmA2 E:x,y,z->A:X,Y-1,Z PLP-dependent transferases Interaction Interface Pymol
e1pmmE2 E:x,y,z->E:X-1,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1pmmE2 E:X-1,Y,Z->E:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmmD2 E:X-1,Y,Z->D:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmmA2 E:X-1,Y+1,Z->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmmC2 E:X-1,Y,Z+1->C:x,y,z PLP-dependent transferases Interaction Interface Pymol