Domain ID e1pmoE2

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Pyridoxal_deC
UID: 001151962
Type: Automatic domain
Parent: e1js3A2
Range: E:4-336
Ligands: PLR TRS
PDB: 1pmo
PDB Description: Glutamate decarboxylase beta
UniProt: P69910
Hsap BLAST neighbor: O95470
Species: Escherichia coli

Structure of domain e1pmoE2

Domains in the same chain:

e1pmoE2 E:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoE3 E:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e1pmoA2 A:12-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoA3 A:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmoB2 B:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoB3 B:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmoC3 C:13-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoC2 C:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmoD3 D:13-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoD2 D:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmoE2 E:4-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoE3 E:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e1pmoF3 F:13-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e1pmoF2 F:337-466 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e1pmoE2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pmoF3 E:X,Y,Z->F:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmoF2 E:X,Y,Z->F:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmoD3 E:x,y,z->D:X,Y,Z PLP-dependent transferases Interaction Interface Pymol
e1pmoD2 E:x,y,z->D:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmoB2 E:x,y,z->B:-Y+1,X-Y,Z-1/3 PLP-dependent transferases Interaction Interface Pymol
e1pmoC3 E:X-1,Y,Z->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmoC2 E:X-1,Y,Z->C:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmoA2 E:x,y,z->A:X,Y-1,Z PLP-dependent transferases Interaction Interface Pymol
e1pmoC3 E:x,y,z->C:-Y+1,X-Y,Z-1/3 PLP-dependent transferases Interaction Interface Pymol
e1pmoC2 E:x,y,z->C:-Y+1,X-Y,Z-1/3 C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1pmoB2 E:-Y+1,X-Y,Z-1/3->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1pmoC3 E:x,y,z->C:X,Y,Z PLP-dependent transferases Interaction Interface Pymol