Domain ID e1ppb.1

Download files:
  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Trypsin,Thrombin_light
UID: 000022764
Type: Automatic domain
Parent: e1h8d.1
Range: L:1C-15,H:16-247
Ligands: 0G6
DrugDomain: DB06841
PDB: 1ppb
PDB Description: ALPHA-THROMBIN (LARGE SUBUNIT) & ALPHA-THROMBIN (SMALL SUBUNIT)
UniProt: P00734
Hsap BLAST neighbor: P00734
Species:

Structure of domain e1ppb.1

Domains in the same chain:

e1ppb.1 L:1C-15,H:16-247 cradle loop barrel RIFT-related FMN-binding split barrel

Domains in the same PDB:

e1ppb.1 L:1C-15,H:16-247 cradle loop barrel RIFT-related FMN-binding split barrel

Structural contacts of domain e1ppb.1 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ppb.1 H:x,y,z->L:X,Y,Z RIFT-related Interaction Interface Pymol
e1ppb.1 L:X,Y,Z->H:x,y,z RIFT-related Interaction Interface Pymol
e1ppb.1 H:x,y,z->H:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1ppb.1 H:-X,Y-1/2,-Z+1/2->H:x,y,z RIFT-related Interaction Interface Pymol
e1ppb.1 H:x,y,z->H:X-1/2,-Y+1/2,-Z+1 RIFT-related Interaction Interface Pymol
e1ppb.1 H:X-1/2,-Y+1/2,-Z+1->H:x,y,z RIFT-related Interaction Interface Pymol
e1ppb.1 H:x,y,z->L:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e1ppb.1 L:-X,Y-1/2,-Z+1/2->H:x,y,z RIFT-related Interaction Interface Pymol
e1ppb.1 H:x,y,z->L:-X+1/2,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1ppb.1 L:-X+1/2,-Y+1,Z-1/2->H:x,y,z RIFT-related Interaction Interface Pymol