ECOD: domain e1ppjS1

Domain ID e1ppjS1

A: alpha arrays
X: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
F: UCR_14kD

UID:	000053521
Type:	Automatic domain
Parent:	e1ppjF1
Range:	S:12-110
Ligands:	BHG CDL PEE PO4
PDB:	1ppj
PDB Description:	Ubiquinol-cytochrome C reductase complex 14 kDa protein
UniProt:	P00129
Hsap BLAST neighbor:	P14927
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e1ppjS1

Domains in the same chain:

Download Pymol

e1ppjS1	S:12-110	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

Structural contacts of domain e1ppjS1 of H-group "14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ppjP1	S:x,y,z->P:X,Y,Z	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Interaction Interface Pymol
e1ppjP2	S:x,y,z->P:X,Y,Z	Transmembrane heme-binding four-helical bundle	Interaction Interface Pymol
e1ppjB1	S:x,y,z->B:X,Y,Z	LuxS, MPP, ThrRS/AlaRS common domain	Interaction Interface Pymol
e1ppjT1	S:X,Y,Z->T:x,y,z	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Interaction Interface Pymol
e1ppjQ2	S:x,y,z->Q:X,Y,Z	cytochrome c1 transmembrane anchor	Interaction Interface Pymol
e1ppjD1	S:-X+1/2,-Y+1,Z-1/2->D:x,y,z	Cytochrome c	Interaction Interface Pymol
e1ppjA1	S:x,y,z->A:X-1/2,-Y+3/2,-Z+1	LuxS, MPP, ThrRS/AlaRS common domain	Interaction Interface Pymol
e1ppjA2	S:x,y,z->A:X,Y,Z	LuxS, MPP, ThrRS/AlaRS common domain	Interaction Interface Pymol

e1ppjA1	A:2-233	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjA2	A:234-442	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjB1	B:17-235	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjB2	B:236-439	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjC2	C:15-260	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e1ppjC1	C:261-379	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjD1	D:1-195	Cytochrome c-like	Cytochrome c	Cytochrome c
e1ppjD2	D:196-241	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor
e1ppjE2	E:1-69	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e1ppjE3	E:70-196	ISP domain	ISP domain	ISP domain
e1ppjF1	F:12-110	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjG1	G:1-75	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjH1	H:13-78	cytochrome bc1 complex 11 kDa protein-like	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjI1	I:32-78	Ubiquinol-cytochrome c reductase 8 kDa protein	Ubiquinol-cytochrome c reductase 8 kDa protein	Ubiquinol-cytochrome c reductase 8 kDa protein
e1ppjJ1	J:30-62	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjN1	N:2-233	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjN2	N:234-442	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjO1	O:17-235	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjO2	O:236-439	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e1ppjP2	P:15-260	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e1ppjP1	P:261-379	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjQ1	Q:1-195	Cytochrome c-like	Cytochrome c	Cytochrome c
e1ppjQ2	Q:196-241	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor
e1ppjR2	R:1-69	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e1ppjR3	R:70-196	ISP domain	ISP domain	ISP domain
e1ppjS1	S:12-110	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjT1	T:1-75	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjU1	U:13-78	cytochrome bc1 complex 11 kDa protein-like	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1ppjV1	V:32-78	Ubiquinol-cytochrome c reductase 8 kDa protein	Ubiquinol-cytochrome c reductase 8 kDa protein	Ubiquinol-cytochrome c reductase 8 kDa protein
e1ppjW1	W:1-62	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)